Protein ZmEREB93
ZmEREB93 is a protein in the AP2/ERF-ERF family.
Information
TF Name: ZmEREB93
Species: Maize
TF Family: AP2/ERF-ERF
Gene Name(Synonym): EREB93
Uniprot ID: B4FTI2

Protein ZmEREB93

ZmEREB93 is a protein in the AP2/ERF-ERF family.

Overview of domains present in v5 transcripts
PF00847
Zm00001eb352570_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d010676DAPseq no logo sequence fimo position
Zm00001d010676DAPseq no logo sequence fimo position
Zm00001d010676ChIPseq no logo sequence fimo position
Zm00001d010676PChIPseq no logo sequence fimo position

Interactions where ZmEREB93 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmEREB93 is the target  
Expand


There are 194 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb352570_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MEWDMRGGGHGSAVGDGGPGGRGLTVGGGVALAVGGGDQQRVEAHYRGVRKRPWGRYAAEIRDPWRKTRVWLGTYDTPVE
AAMAYDRAAVALRGSKARTNFTAGRGGARATPVQARPLPHPALAPGHFSGLDATHSSPWHVVYLPPPRLHQQALAPPMPL
VAVAGDVATSLPSTALELRTGPKALPFDLNEPPSLLFGSLSP

MEWDMRGGGHGSAVGDGGPGGRGLTVGGGVALAVGGGDQQRVEAHYRGVRKRPWGRYAAEIRDPWRKTRVWLGTYDTPVE
AAMAYDRAAVALRGSKARTNFTAGRGGARATPVQARPLPHPALAPGHFSGLDATHSSPWHVVYLPPPRLHQQALAPPMPL
VAVAGDVATSLPSTALELRTGPKALPFDLNEPPSLLFGSLSP

MEWDMRGGGHGSAVGDGGPGGRGLTVGGGVALAVGGGDQQRVEAHYRGVRKRPWGRYAAEIRDPWRKTRVWLGTYDTPVE
AAMAYDRAAVALRGSKARTNFTAGRGGARATPVQARPLPHPALAPGHFSGLDATHSSPWHVVYLPPPRLHQQALAPPMPL
VAVAGDVATSLPSTALELRTGPKALPFDLNEPPSLLFGSLSP

MEWDMRGGGHGSAVGDGGPGGRGLTVGGGVALAVGGGDQQRVEAHYRGVRKRPWGRYAAEIRDPWRKTRVWLGTYDTPVE
AAMAYDRAAVALRGSKARTNFTAGRGGARATPVQARPLPHPALAPGHFSGLDATHSSPWHVVYLPPPRLHQQALAPPMPL
VAVAGDVATSLPSTALELRTGPKALPFDLNEPPSLLFGSLSP

MEWDMRGGGHGSAVGDGGPGGRGLTVGGGVALAVGGGDQQRVEAHYRGVRKRPWGRYAAEIRDPWRKTRVWLGTYDTPVE
AAMAYDRAAVALRGSKARTNFTAGRGGARATPVQARPLPHPALAPGHFSGLDATHSSPWHVVYLPPPRLHQQALAPPMPL
VAVAGDVATSLPSTALELRTGPKALPFDLNEPPSLLFGSLSP

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00847
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

CGCCGGACGAGACCAGTCGCAAACT...

GRMZM2G066158_T01 from maize genome v3


Related TFome: pUT3488

Amino Acid Sequence
Copy to clipboard

MQQMEWDMRGGGHGSAVGDGGPGGRGLTVGGGVALAVGGGDQQRVEAHYRGVRKRPWGRYAAEIRDPWRKTRVWLGTYDT
PVEAAMAYDRAAVALRGSKARTNFTAGRGGARATPVQARPLPHPALAPGHFSGLDATHSSPWHVVYLPPPRLHQQALAPP
MPLVAVAGDVATSLPSTALELRTGPKALPFDLNEPPSLLFGSLSP

Nucleotide Sequence
Copy to clipboard
     
Expand

ACACACCCGGTCAGCGACAGCCTCA...

Zm00001d010676_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MQQMEWDMRGGGHGSAVGDGGPGGRGLTVGGGVALAVGGGDQQRVEAHYRGVRKRPWGRYAAEIRDPWRKTRVWLGTYDT
PVEAAMAYDRAAVALRGSKARTNFTAGRGGARATPVQARPLPHPALAPGHFSGLDATHSSPWHVVYLPPPRLHQQALAPP
MPLVAVAGDVATSLPSTALELRTGPKALPFDLNEPPSLLFGSLSP

Nucleotide Sequence
Copy to clipboard
     
Expand

ATGCAGCAGATGGAGTGGGACATGA...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26